com.bitplane.xt.util

Class ColorTableUtils

java.lang.Object

com.bitplane.xt.util.ColorTableUtils

public final class ColorTableUtils
extends Object

Convert Imaris color tables to imglib2.

Author:

Tobias Pietzsch

Method Summary

Modifier and Type	Method and Description
static ColorTable8	createChannelColorTable(Imaris.IDataSetPrx dataset, int channel) Create an imglib2 ColorTable8 for the given channel of dataset.
static <T extends NumericType<T> & RealType<T>> Converter<T,ARGBType>	createChannelConverterToARGB(T type, Imaris.IDataSetPrx dataset, int channel) Construct a converters for the specified channel with display range and color set up according to Imaris.
static ARGBType	getChannelColor(Imaris.IDataSetPrx dataset, int channel) Get the base color of the given channel of dataset as an imglib2 ARGBType.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

createChannelColorTable

public static ColorTable8 createChannelColorTable(Imaris.IDataSetPrx dataset,
                                                  int channel)
                                           throws Imaris.Error

Create an imglib2 ColorTable8 for the given channel of dataset. If the channel has a colortable, translate it. Otherwise, construct a ramp colortable from the base color of the channel.

Throws:

Imaris.Error

getChannelColor

public static ARGBType getChannelColor(Imaris.IDataSetPrx dataset,
                                       int channel)
                                throws Imaris.Error

Get the base color of the given channel of dataset as an imglib2 ARGBType.

Throws:

Imaris.Error

createChannelConverterToARGB

public static <T extends NumericType<T> & RealType<T>> Converter<T,ARGBType> createChannelConverterToARGB(T type,
                                                                                                          Imaris.IDataSetPrx dataset,
                                                                                                          int channel)
                                                                                                   throws Imaris.Error

Construct a converters for the specified channel with display range and color set up according to Imaris.

Throws:

Imaris.Error